Index

Symbols

--calibrate-per-charge im2deep-predict command line option --calibration-precursors im2deep-predict command line option --ion-mobility im2deep-predict command line option --logging-level im2deep command line option im2deep-predict command line option --model-name im2deep-predict command line option --multi im2deep-predict command line option --output-file im2deep-predict command line option --processes im2deep-predict command line option --profile im2deep command line option --profile-name im2deep command line option

--use-charge-state im2deep-predict command line option --use-single-model im2deep-predict command line option --version im2deep command line option -c im2deep-predict command line option -e im2deep-predict command line option -i im2deep-predict command line option -l im2deep command line option im2deep-predict command line option -m im2deep-predict command line option -n im2deep-predict command line option -o im2deep-predict command line option

A

args (im2deep.exceptions.IM2DeepError attribute)

C

calculate_ccs_shift_global() (im2deep.calibration.LinearCCSCalibration method) calculate_ccs_shift_per_charge() (im2deep.calibration.LinearCCSCalibration method) Calibration (class in im2deep.calibration)

CalibrationError ccs2im() (in module im2deep) (in module im2deep.utils)

F

fit() (im2deep.calibration.Calibration method) (im2deep.calibration.LinearCCSCalibration method)

G

get_default_reference() (in module im2deep.calibration)

I

im2ccs() (in module im2deep) (in module im2deep.utils) im2deep module im2deep command line option --logging-level --profile --profile-name --version -l im2deep-predict command line option --calibrate-per-charge --calibration-precursors --ion-mobility --logging-level --model-name --multi --output-file --processes --use-charge-state --use-single-model -c -e -i -l -m -n -o INPUT_FILE

im2deep.calibration module im2deep.core module im2deep.exceptions module im2deep.utils module IM2DeepError INPUT_FILE im2deep-predict command line option is_fitted (im2deep.calibration.Calibration property) (im2deep.calibration.LinearCCSCalibration property)

L

LinearCCSCalibration (class in im2deep.calibration)

M

module im2deep im2deep.calibration im2deep.core im2deep.exceptions im2deep.utils

P

predict() (in module im2deep) (in module im2deep.core)

predict_and_calibrate() (in module im2deep) (in module im2deep.core) PSMMetadataError

T

train() (in module im2deep.core)

transform() (im2deep.calibration.Calibration method) (im2deep.calibration.LinearCCSCalibration method)